Is there a book or two that covers the subject? A quick search finds a few things but I don't know what is legit or not.
Here is two that I was thinking about to get a good idea on the subject:
Hacking with Kali: Practical Penetration Testing Techniques by James Broad
Web Penetration Testing with Kali Linux by Joseph Muniz
Some of the tools I am familier with but others are not, not looking for a step by step guide on how to do something but more these are are the resources available in Kali, here are what they are used for etc. A good general guide.